STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2M1R0_ORYLAZgc:77752. (451 aa)    
Predicted Functional Partners:
wls
Wnt ligand secretion mediator.
    
 0.600
H2M6E4_ORYLA
Uncharacterized protein.
    
  0.559
LOC101165932
Intersectin 2a.
    
  0.559
ENSORLP00000034742
Uncharacterized protein.
    
  0.559
ENSORLP00000036645
EH domain-containing protein.
    
  0.559
ENSORLP00000041578
SH3 domain-containing protein.
    
  0.559
ryk
Receptor like tyrosine kinase.
    
 0.522
dvl3
Dishevelled segment polarity protein 3a.
    
 0.430
dvl2
Dishevelled segment polarity protein 2.
    
 0.430
dvl1
Dishevelled segment polarity protein 1a.
    
 0.430
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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