Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H2LSI7_ORYLA | LOC101159604 | ENSORLP00000009051 | ENSORLP00000012488 | Bmi1 polycomb ring finger oncogene 1a. | Uncharacterized protein. | 0.556 |
H2LSI7_ORYLA | LOC101160413 | ENSORLP00000009051 | ENSORLP00000011287 | Bmi1 polycomb ring finger oncogene 1a. | Chromobox homolog 8a (Pc class homolog, Drosophila). | 0.935 |
H2LSI7_ORYLA | LOC101172611 | ENSORLP00000009051 | ENSORLP00000039934 | Bmi1 polycomb ring finger oncogene 1a. | Chromo domain-containing protein. | 0.924 |
H2LSI7_ORYLA | LOC101175061 | ENSORLP00000009051 | ENSORLP00000004495 | Bmi1 polycomb ring finger oncogene 1a. | Scm polycomb group protein like 2. | 0.790 |
H2LSI7_ORYLA | RING1 | ENSORLP00000009051 | ENSORLP00000031993 | Bmi1 polycomb ring finger oncogene 1a. | Ring finger protein 1. | 0.973 |
H2LSI7_ORYLA | SCML2 | ENSORLP00000009051 | ENSORLP00000020478 | Bmi1 polycomb ring finger oncogene 1a. | Scm polycomb group protein like 2. | 0.790 |
H2LSI7_ORYLA | cbx8 | ENSORLP00000009051 | ENSORLP00000027763 | Bmi1 polycomb ring finger oncogene 1a. | Chromobox homolog 8b. | 0.935 |
H2LSI7_ORYLA | pcgf2 | ENSORLP00000009051 | ENSORLP00000040584 | Bmi1 polycomb ring finger oncogene 1a. | RING-type domain-containing protein. | 0.551 |
H2LSI7_ORYLA | rnf2 | ENSORLP00000009051 | ENSORLP00000006752 | Bmi1 polycomb ring finger oncogene 1a. | Ring finger protein 2. | 0.973 |
H2LSI7_ORYLA | scmh1 | ENSORLP00000009051 | ENSORLP00000017822 | Bmi1 polycomb ring finger oncogene 1a. | SAM domain-containing protein. | 0.790 |
LOC101159604 | H2LSI7_ORYLA | ENSORLP00000012488 | ENSORLP00000009051 | Uncharacterized protein. | Bmi1 polycomb ring finger oncogene 1a. | 0.556 |
LOC101159604 | LOC101160413 | ENSORLP00000012488 | ENSORLP00000011287 | Uncharacterized protein. | Chromobox homolog 8a (Pc class homolog, Drosophila). | 0.573 |
LOC101159604 | LOC101172611 | ENSORLP00000012488 | ENSORLP00000039934 | Uncharacterized protein. | Chromo domain-containing protein. | 0.565 |
LOC101159604 | LOC101175061 | ENSORLP00000012488 | ENSORLP00000004495 | Uncharacterized protein. | Scm polycomb group protein like 2. | 0.523 |
LOC101159604 | RING1 | ENSORLP00000012488 | ENSORLP00000031993 | Uncharacterized protein. | Ring finger protein 1. | 0.570 |
LOC101159604 | SCML2 | ENSORLP00000012488 | ENSORLP00000020478 | Uncharacterized protein. | Scm polycomb group protein like 2. | 0.523 |
LOC101159604 | cbx8 | ENSORLP00000012488 | ENSORLP00000027763 | Uncharacterized protein. | Chromobox homolog 8b. | 0.573 |
LOC101159604 | pcgf2 | ENSORLP00000012488 | ENSORLP00000040584 | Uncharacterized protein. | RING-type domain-containing protein. | 0.556 |
LOC101159604 | rnf2 | ENSORLP00000012488 | ENSORLP00000006752 | Uncharacterized protein. | Ring finger protein 2. | 0.570 |
LOC101159604 | scmh1 | ENSORLP00000012488 | ENSORLP00000017822 | Uncharacterized protein. | SAM domain-containing protein. | 0.523 |
page 1 of 6