STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101154988ELL associated factor 2. (264 aa)    
Predicted Functional Partners:
aff4
AF4/FMR2 family, member 4.
    
 0.960
eaf1
ELL associated factor 1.
  
 
0.940
ell
Elongation factor RNA polymerase II.
    
 0.908
supt5h
Transcription elongation factor SPT5.
    
 0.901
LOC101159914
Si:ch211-13k12.2.
    
 0.896
ell2
Elongation factor, RNA polymerase II, 2.
    
 0.896
LOC101155504
Uncharacterized protein.
    
 0.896
LOC101169625
Uncharacterized protein.
    
 0.892
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
  0.891
LOC101166672
Uncharacterized protein.
    
 0.874
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.