STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhrs12Dehydrogenase/reductase (SDR family) member 12. (318 aa)    
Predicted Functional Partners:
retsat
Retinol saturase (all-trans-retinol 13,14-reductase).
    
 0.597
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
  
 0.581
cyp3a40
Cytochrome P450 3A40.
   
 
 0.529
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.525
dhrs11
Dehydrogenase/reductase (SDR family) member 11a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.514
LOC101163014
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
    
 
 0.504
hibadh
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
    
 
 0.503
LOC101162567
Ninjurin 2.
   
  
 0.501
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
      
 0.499
LOC101164035
Spectrin beta chain; Belongs to the spectrin family.
      
 0.499
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.