STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c1galt1Si:dkey-202e17.1. (244 aa)    
Predicted Functional Partners:
LOC101164026
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 0.932
st3gal1
Alpha-2,3-sialyltransferase ST3Gal I; Belongs to the glycosyltransferase 29 family.
    
 0.925
st3gal2
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 0.921
gcnt1
Uncharacterized protein.
   
 0.918
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
   
 0.918
gcnt4
Si:dkeyp-87d8.8.
   
 0.917
nelfcd
Negative elongation factor complex member C/D.
    
 0.892
nelfb
Negative elongation factor complex member B.
   
 0.890
nelfe
Negative elongation factor complex member E.
   
 0.881
supt5h
Transcription elongation factor SPT5.
   
 0.819
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.