STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
p2ry2Purinergic receptor P2Y2, tandem duplicate 1; Belongs to the G-protein coupled receptor 1 family. (341 aa)    
Predicted Functional Partners:
tsku
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
    
 
 0.672
tbrg1
Transforming growth factor beta regulator 1.
      
 0.669
acer3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.646
fchsd2
FCH and double SH3 domains 2.
      
 0.639
hspa13
Heat shock protein 70 family, member 13.
      
 0.606
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
      
 0.591
myo7a
Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.582
p2rx4
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
      
 0.561
p2rx2
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
      
 0.558
tfec
Transcription factor EC.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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