STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174953Arachidonate 12-lipoxygenase. (739 aa)    
Predicted Functional Partners:
LOC101162978
Uncharacterized protein.
  
 
 
0.932
LOC101174158
Uncharacterized protein.
  
 
 
0.932
LOC101165945
Uncharacterized protein.
  
 
 
0.929
LOC101170499
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
   
 0.916
PLA2G12B
Phospholipase A2 group XIIB.
   
 0.914
pla2g4a
Phospholipase A2.
   
 
 0.911
LOC101173634
Prostaglandin-endoperoxide synthase 1.
   
 
 0.908
LOC101161174
Prostaglandin-endoperoxide synthase 1.
   
 
 0.908
ptgs2
EGF-like domain-containing protein.
   
 
 0.908
pla2g4c
Uncharacterized protein.
     
 0.907
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.