STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
en2Homeobox protein engrailed-like. (268 aa)    
Predicted Functional Partners:
pax2
Paired box 2b.
   
  
 0.571
zic5
Zic family member 5 (odd-paired homolog, Drosophila).
      
 0.563
wnt1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.538
fgf8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.528
pax5
Paired box 5.
   
  
 0.512
LOC100125464
Uncharacterized protein.
    
 
 0.411
TLE3
TLE family member 3, transcriptional corepressor.
    
 
 0.411
TLE4
Uncharacterized protein.
    
 
 0.411
LOC100049394
TLE family member 3, transcriptional corepressor.
    
 
 0.411
LOC101161767
TLE_N domain-containing protein.
    
 
 0.411
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.