STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cntn2Contactin 2. (1034 aa)    
Predicted Functional Partners:
LOC101164215
Uncharacterized protein.
   
0.967
l1cam
L1 cell adhesion molecule, paralog a.
   
0.967
LOC101156356
Contactin associated protein like 2b.
   
 0.947
cntnap2
Contactin associated protein like 2.
   
 0.947
LOC101171409
Uncharacterized protein.
   
0.696
LOC101156543
Neuronal cell adhesion molecule a.
   
0.696
LOC101160163
Uncharacterized protein.
   
0.690
nfasc
Neurofascin homolog (chicken) a.
   
0.690
chl1
Cell adhesion molecule L1-like b.
   
0.690
ptprg
Carbonic anhydrase XVI b.
    
 0.689
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.