STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165737Elastase 3 like; Belongs to the peptidase S1 family. (271 aa)    
Predicted Functional Partners:
LOC101175393
Macrophage stimulating 1 receptor a.
    
 0.588
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.588
mst1r
Macrophage stimulating 1 receptor b.
    
 0.588
LOC101155461
Fatty acid binding protein 10a, liver basic.
   
  
 0.580
LOC101172916
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.551
CEL
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
 0.533
LOC101170246
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
  
 
0.524
ptf1a
Pancreas associated transcription factor 1a.
   
  
 0.493
ENSORLP00000032656
Uncharacterized protein.
    
  0.492
c5
Uncharacterized protein.
   
  0.474
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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