STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160271Si:ch73-174h16.4. (548 aa)    
Predicted Functional Partners:
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.728
fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.698
LOC111946374
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.570
ydjc
YdjC chitooligosaccharide deacetylase homolog.
  
 
 0.532
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.492
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.492
fgf18
Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family.
    
 0.485
rps27a
Ribosomal protein S27a.
    
 0.472
fgf3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.457
fgf4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.453
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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