STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cemip2Cell migration inducing hyaluronidase 2. (1386 aa)    
Predicted Functional Partners:
LOC101169103
Hyaluronidase.
   
 0.560
LOC101171014
Heterogeneous nuclear ribonucleoprotein D.
      
 0.516
olfm3
Olfactomedin 3a.
      
 0.515
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.502
gabrg2
Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.501
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.465
EFNA5
Ephrin A5; Belongs to the ephrin family.
   
  
 0.446
FGF14
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.436
NELL1
Neural EGFL like 1.
    
 0.412
anks1b
Ankyrin repeat and sterile alpha motif domain containing 1B.
   
 
 0.411
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.