STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrTyrosinase; This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds. (547 aa)    
Predicted Functional Partners:
TYR
Tyrosinase.
  
 
 
0.918
LOC101163441
Amine oxidase.
   
  0.910
LOC101161073
Amine oxidase.
   
  0.910
LOC101171229
Amine oxidase.
   
  0.910
ddc
Uncharacterized protein.
   
 0.910
LOC105356325
Amine oxidase.
   
  0.910
LOC101160780
Amine oxidase.
    
 0.909
th2
BH4_AAA_HYDROXYL_2 domain-containing protein.
     
 0.905
th
Tyrosine hydroxylase 1.
     
 0.905
H2LNR2_ORYLA
Eosinophil peroxidase.
   
 
 0.904
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.