STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrc1Mannose receptor, C type 1a. (1430 aa)    
Predicted Functional Partners:
MTSS1
MTSS I-BAR domain containing 1.
    
 0.601
mtss1
IMD domain-containing protein.
    
 0.601
LOC100301586
CD40 molecule, TNF receptor superfamily member 5.
      
 0.569
rftn1
Uncharacterized protein.
      
 0.568
satb1
SATB homeobox 1b.
      
 0.568
LOC101171361
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 
 0.550
aicda
Activation-induced cytidine deaminase.
   
  
 0.549
nod1
Nucleotide-binding oligomerization domain containing 1.
      
 0.547
LOC100049442
Nuclear receptor subfamily 5, group A, member 5.
   
  
 0.508
LOC101155542
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.506
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.