STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175655Solute carrier family 17 member 7a. (586 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.676
ENSORLP00000026521
Uncharacterized protein.
   
 
 0.673
ENSORLP00000034554
C2 domain-containing protein.
   
 
 0.673
syt1
Synaptotagmin Ia.
   
 
 0.469
LOC101170749
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.469
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.469
LOC101156534
Synaptotagmin Vb.
   
 
 0.464
LOC101157206
Uncharacterized protein.
   
 
 0.464
LOC101161806
Synaptotagmin IIa.
   
 
 0.464
LOC101173249
Zgc:92912.
   
 
 0.446
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.