Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101155262 | LOC101170189 | ENSORLP00000036924 | ENSORLP00000028620 | Trafficking protein, kinesin binding 2. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.681 |
LOC101155262 | LOC101171386 | ENSORLP00000036924 | ENSORLP00000004309 | Trafficking protein, kinesin binding 2. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.681 |
LOC101155262 | cfap70 | ENSORLP00000036924 | ENSORLP00000001661 | Trafficking protein, kinesin binding 2. | Uncharacterized protein. | 0.681 |
LOC101155262 | myo19 | ENSORLP00000036924 | ENSORLP00000014170 | Trafficking protein, kinesin binding 2. | Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.558 |
LOC101155262 | rhot2 | ENSORLP00000036924 | ENSORLP00000027890 | Trafficking protein, kinesin binding 2. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.800 |
LOC101170189 | LOC101155262 | ENSORLP00000028620 | ENSORLP00000036924 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Trafficking protein, kinesin binding 2. | 0.681 |
LOC101170189 | lrguk | ENSORLP00000028620 | ENSORLP00000031908 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Leucine-rich repeats and guanylate kinase domain containing. | 0.468 |
LOC101170189 | myo19 | ENSORLP00000028620 | ENSORLP00000014170 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.636 |
LOC101171386 | LOC101155262 | ENSORLP00000004309 | ENSORLP00000036924 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Trafficking protein, kinesin binding 2. | 0.681 |
LOC101171386 | lrguk | ENSORLP00000004309 | ENSORLP00000031908 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Leucine-rich repeats and guanylate kinase domain containing. | 0.468 |
LOC101171386 | myo19 | ENSORLP00000004309 | ENSORLP00000014170 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.636 |
LOC101171386 | rhot2 | ENSORLP00000004309 | ENSORLP00000027890 | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.901 |
Mrm1 | myo19 | ENSORLP00000043177 | ENSORLP00000014170 | Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae). | Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.558 |
Mrm1 | pigw | ENSORLP00000043177 | ENSORLP00000014175 | Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae). | Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor. | 0.558 |
Mrm1 | tada2a | ENSORLP00000043177 | ENSORLP00000043389 | Mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae). | Transcriptional adapter. | 0.578 |
cfap70 | LOC101155262 | ENSORLP00000001661 | ENSORLP00000036924 | Uncharacterized protein. | Trafficking protein, kinesin binding 2. | 0.681 |
cfap70 | lrguk | ENSORLP00000001661 | ENSORLP00000031908 | Uncharacterized protein. | Leucine-rich repeats and guanylate kinase domain containing. | 0.476 |
cfap70 | myo19 | ENSORLP00000001661 | ENSORLP00000014170 | Uncharacterized protein. | Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.636 |
exoc4 | myo19 | ENSORLP00000018215 | ENSORLP00000014170 | Exocyst complex component 4. | Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.494 |
lrguk | LOC101170189 | ENSORLP00000031908 | ENSORLP00000028620 | Leucine-rich repeats and guanylate kinase domain containing. | Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. | 0.468 |
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