STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kctd12Potassium channel tetramerisation domain containing 12.1. (294 aa)    
Predicted Functional Partners:
LOC101175353
SIX homeobox 7.
      
 0.676
sox1
HMG box domain-containing protein.
    
 
 0.641
foxd3
Forkhead box D3.
      
 0.596
tcf7l2
Transcription factor 7 like 2.
      
 0.553
LOC101172920
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.515
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.515
commd1
Copper metabolism (Murr1) domain containing 1.
     
 0.433
gng8
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 
 0.424
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
   
 0.414
kctd2
Potassium channel tetramerization domain containing 2.
   
0.409
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.