STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttyh1Protein tweety homolog; Probable chloride channel; Belongs to the tweety family. (537 aa)    
Predicted Functional Partners:
LOC101171355
Uncharacterized protein.
      
 0.454
LOC101168054
Recoverin 3.
      
 0.452
cercam
Cerebral endothelial cell adhesion molecule.
      
 0.441
LOC101164199
Visinin-like 1a.
   
  
 0.440
LOC101165915
Recoverin 2.
      
 0.439
Tmprss7
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.438
gnai2
Guanine nucleotide-binding protein G(i) subunit alpha-2; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(i) proteins are involved in hormonal regulation of adenylate cyclase: they inhibit the cyclase in response to beta- adrenergic stimuli. May play a role in cell division (By similarity).
      
 0.438
cnga2
Cyclic nucleotide gated channel alpha 2b.
      
 0.434
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
      
 0.432
LOC101164892
Recoverin a.
      
 0.431
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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