STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zdhhc7Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (332 aa)    
Predicted Functional Partners:
impad1
Inositol monophosphatase domain containing 1.
 
 
    0.569
tmem42
Transmembrane protein 42b.
      
 0.558
pot1
Protection of telomeres 1 homolog.
    
 0.513
esr2
Uncharacterized protein.
    
 0.508
esr2-2
Uncharacterized protein.
    
 0.508
esr1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.508
ENSORLP00000035938
Uncharacterized protein.
    
 0.486
sdr42e1
Short chain dehydrogenase/reductase family 42E, member 1; Belongs to the 3-beta-HSD family.
    
 
 0.405
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
      
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.