STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101169850Thioredoxin reductase 3. (606 aa)    
Predicted Functional Partners:
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.946
cth
Cystathionase (cystathionine gamma-lyase), like.
  
 0.938
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.930
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.930
kyat1
Kynurenine aminotransferase 1.
  
 0.929
LOC101173380
Kynurenine aminotransferase 3.
  
 0.929
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.924
scly
Selenocysteine lyase.
  
 0.923
LOC101162447
Selenophosphate synthetase 2.
  
 
 0.923
sephs1
Selenophosphate synthetase 1.
  
 
 0.923
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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