STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUSKMuscle associated receptor tyrosine kinase. (800 aa)    
Predicted Functional Partners:
DOK7
Docking protein 7.
    
 0.878
LOC101155825
Docking protein 7.
    
 0.878
agrn
Agrin.
    
 0.828
wnt11
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 0.733
rapsn
Receptor-associated protein of the synapse, 43kD.
   
  
 0.680
LOC101155037
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.598
H2LL78_ORYLA
Low density lipoprotein receptor-related protein 2b.
   
 0.571
lrp2
Low density lipoprotein receptor-related protein 2a.
   
 0.571
ENSORLP00000028404
Uncharacterized protein.
   
 0.571
ENSORLP00000032452
Uncharacterized protein.
   
 0.571
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.