STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC6Transmembrane channel-like protein. (829 aa)    
Predicted Functional Partners:
tcte1
T-complex-associated-testis-expressed 1.
    
 0.624
LOC101174359
Cor1 domain-containing protein.
    
 0.619
LOC101164089
Fatty acid binding protein 11b; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.568
scp3
Cor1 domain-containing protein.
    
 0.568
aqp1
Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.556
alv
Metalloendopeptidase.
     
 0.520
npc2
Niemann-Pick disease, type C2.
      
 0.512
fabp7
Brain-specific fatty acid binding protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
     
 0.504
ENSORLP00000032656
Uncharacterized protein.
   
 0.472
efhb
Uncharacterized protein.
    
 
 0.407
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.