STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100049331Zona pellucida protein AX 1. (916 aa)    
Predicted Functional Partners:
1-sf
ZP domain-containing protein.
   
 0.573
H2L4Z2_ORYLA
Histone H2A; Belongs to the histone H2A family.
   
 0.491
ENSORLP00000032656
Uncharacterized protein.
   
 0.472
ogg1
8-oxoguanine DNA glycosylase.
     
 0.471
LOC101164783
ZP domain-containing protein.
   
 
 0.450
ovca2
OVCA2 serine hydrolase domain containing.
      
 0.440
sox6b
SRY-box containing gene 6b.
      
 0.437
LOC101169927
Uncharacterized protein.
  
  0.432
LOC101156733
Wee1-like protein kinase.
   
 
 0.425
LOC101166143
Growth differentiation factor 9.
   
 0.418
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.