STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170803Receptor expression-enhancing protein. (184 aa)    
Predicted Functional Partners:
snx15
Sorting nexin 15.
    
   0.728
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.488
rhbdd3
Rhomboid domain containing 3.
      
 0.472
LOC101163104
Reticulon.
    
 
 0.467
LOC101170222
Reticulon.
    
 
 0.467
rtn1
Reticulon.
    
 
 0.467
LOC101161432
Reticulon.
    
 
 0.467
ENSORLP00000027225
Uncharacterized protein.
    
 
 0.467
LOC101163837
Reticulon.
    
 
 0.467
ENSORLP00000045485
Reticulon.
    
 
 0.467
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.