STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
toe1Target of EGR1, exonuclease. (518 aa)    
Predicted Functional Partners:
snupn
Snurportin 1.
    
 
 0.672
dcp2
Decapping mRNA 2.
     
 0.669
ENSORLP00000027141
DCP2 domain-containing protein.
     
 0.669
Gemin8
Gem (nuclear organelle) associated protein 8.
      
 0.620
exosc5
Exosome component 5.
     
 0.614
exosc2
Exosome component 2.
   
 
 0.593
exosc8
Exosome component 8.
     
 0.590
exosc9
Exosome component 9.
   
 
 0.584
gemin4
Gem (nuclear organelle) associated protein 4.
   
  
 0.571
helz2
RNB domain-containing protein.
   
 
 0.569
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.