STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lpcat3Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (459 aa)    
Predicted Functional Partners:
lpcat2
Lysophosphatidylcholine acyltransferase 2.
     
 0.945
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
     
 0.940
mboat2
Membrane bound O-acyltransferase domain containing 2a; Belongs to the membrane-bound acyltransferase family.
     
0.936
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.922
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.922
lypla1
Lysophospholipase 1.
   
 
 0.917
plb1
Si:ch211-214p16.3.
     
 0.914
mboat1
Membrane bound O-acyltransferase domain containing 1; Belongs to the membrane-bound acyltransferase family.
     
0.911
LOC101162058
Phospholipase D family, member 3.
     
 0.906
pla1a
Phospholipase A1 member A.
     
 0.906
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.