STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2MBB3_ORYLAVitellogenin domain-containing protein. (793 aa)    
Predicted Functional Partners:
H2M6E4_ORYLA
Uncharacterized protein.
   
 
 0.955
LOC101165932
Intersectin 2a.
   
 
 0.955
ENSORLP00000034742
Uncharacterized protein.
   
 
 0.955
ENSORLP00000036645
EH domain-containing protein.
   
 
 0.955
ENSORLP00000041578
SH3 domain-containing protein.
   
 
 0.955
LOC101169721
Apolipoprotein A-Ib.
   
 0.925
mttp
Microsomal triglyceride transfer protein.
   
 0.899
LOC101161673
Apolipoprotein Eb.
   
 0.896
LOC101166399
Apolipoprotein Ea.
   
 0.871
cetp
Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.
   
 
 0.860
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.