STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155504Uncharacterized protein. (605 aa)    
Predicted Functional Partners:
eaf1
ELL associated factor 1.
    
 0.937
aff4
AF4/FMR2 family, member 4.
   
 0.933
LOC101154988
ELL associated factor 2.
    
 0.896
LOC101169625
Uncharacterized protein.
   
 0.893
supt5h
Transcription elongation factor SPT5.
    
 0.854
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.848
ccnk
Cyclin K; Belongs to the cyclin family.
    
 0.821
LOC101157196
Cyclin T2b; Belongs to the cyclin family.
    
 0.817
ccnt1
Cyclin T1; Belongs to the cyclin family.
    
 0.817
ccnt2
Cyclin T2; Belongs to the cyclin family.
    
 0.817
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.