STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou2f1POU domain protein. (715 aa)    
Predicted Functional Partners:
pou2f2
POU domain protein.
     
0.912
pou2f3
POU domain protein.
     
0.902
sfrp2
Secreted frizzled-related protein 2.
      
 0.690
pou2af1
Uncharacterized protein.
    
 
 0.631
sp1
Sp1 transcription factor.
    
 0.620
snapc4
Small nuclear RNA activating complex, polypeptide 4.
    
  0.577
znf143
Zinc finger protein 143b.
    
  0.563
ENSORLP00000032968
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
    
 0.542
LOC101160197
E1A binding protein p300 a.
   
 0.528
LOC101168870
E1A binding protein p300 b.
   
 0.528
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.