STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167902Tyrosine-protein kinase. (511 aa)    
Predicted Functional Partners:
LOC101162652
FERM domain-containing protein.
 
 
 0.807
LOC101163549
Uncharacterized protein.
   
 0.766
hlx
H2.0-like homeo box 1 (Drosophila).
      
 0.674
matk
Tyrosine-protein kinase.
  
0.662
akirin2
Akirin 2.
    
 
 0.657
LOC101168162
Uncharacterized protein.
    
 
 0.657
LOC101158271
Tyrosine-protein kinase.
  
0.654
CSK
Tyrosine-protein kinase.
  
0.653
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
   
 0.629
grb2
Growth factor receptor-bound protein 2b.
   
0.623
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.