STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175444Immunoglobulin-like domain containing receptor 1b. (553 aa)    
Predicted Functional Partners:
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
  
 
  0.575
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
  
 
  0.575
LOC101155954
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
  
 
  0.557
ENSORLP00000036342
Stereocilin.
    
 0.546
ripor2
RHO family interacting cell polarization regulator 2.
     
 0.504
prps1
Phosphoribosyl pyrophosphate synthetase 1B.
      
 0.501
tmem132e
Transmembrane protein 132E.
      
 0.501
wfikkn2
Info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a.
  
 
   0.485
LOC101161126
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b.
  
 
   0.476
Wfikkn1
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
  
 
   0.474
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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