STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot13Acyl-CoA thioesterase 13. (142 aa)    
Predicted Functional Partners:
ubiad1
UbiA prenyltransferase domain containing 1.
    
 0.950
mcat
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
  
 0.950
LMOD3
Leiomodin 3.
      
 0.823
oxsm
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.722
acot7
Acyl-CoA thioesterase 7.
   
 
 0.719
acot8
Acyl-CoA thioesterase 8.
     
 0.645
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
  
 0.631
pbdc1
Polysaccharide biosynthesis domain containing 1.
      
 0.608
acot9
Acyl-CoA thioesterase 9, tandem duplicate 2.
   
 
 0.604
pctp
Phosphatidylcholine transfer protein.
    
 
 0.596
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.