STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
myo3aMyosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1596 aa)    
Predicted Functional Partners:
Espnl
Espin like a.
    
 0.699
espn
Espin.
    
 0.699
ENSORLP00000041234
ANK_REP_REGION domain-containing protein.
    
 0.699
LOC101172563
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 
0.661
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 
0.661
LOC110014671
Uncharacterized protein.
     
 0.644
LOC101156094
Whirlin b.
   
 0.599
whrn
Whirlin a.
   
 0.599
twf1
Twinfilin actin-binding protein 1a.
     
 0.596
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.572
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.