STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nectin2Si:ch73-22o12.1. (532 aa)    
Predicted Functional Partners:
LOC101170697
Nectin cell adhesion molecule 3b.
    
 
0.922
cd226
CD226 molecule.
   
  0.915
afdn
Afadin, adherens junction formation factor a.
     
 0.911
pard3
Par-3 family cell polarity regulator alpha, b.
    
  0.901
PARD3
Par-3 family cell polarity regulator.
    
  0.901
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.892
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.882
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
    
 0.841
timm50
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.749
tomm6
Translocase of outer mitochondrial membrane 6 homolog (yeast).
    
 0.748
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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