STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pts6-pyruvoyltetrahydropterin synthase. (147 aa)    
Predicted Functional Partners:
LOC101161367
GTP cyclohydrolase 2.
  
 
 0.995
spr
Sepiapterin reductase b.
  
 
 0.993
LOC101168423
GTP cyclohydrolase 1.
  
 
 0.938
cbr1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.932
LOC101167259
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
    
 0.903
LOC101155674
Alkaline phosphatase, intestinal, tandem duplicate 2; Belongs to the alkaline phosphatase family.
     
  0.900
LOC101155917
Alkaline phosphatase.
     
  0.900
LOC101159123
Alkaline phosphatase.
     
  0.900
alpl
Alkaline phosphatase.
     
  0.900
gchfr
GTP cyclohydrolase I feedback regulator.
     
 0.821
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.