STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173957Multivesicular body subunit 12Ba. (294 aa)    
Predicted Functional Partners:
vps37b
Zgc:114173.
   
 0.984
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.982
vps37a
VPS37A subunit of ESCRT-I.
   
 0.956
LOC101166028
Zgc:123278.
    
 0.954
tsg101
Tumor susceptibility 101a.
    
 0.954
mvb12a
Uncharacterized protein.
    
0.949
LOC101171305
VPS37C subunit of ESCRT-I.
   
 0.913
ENSORLP00000040649
VPS37 C-terminal domain-containing protein.
   
 0.913
LOC105355693
Si:ch211-284f22.3.
   
 0.908
LOC101164318
Multivesicular body subunit 12Bb.
  
  
 
0.903
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.