STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTD2Hydroxyacyl-thioester dehydratase type 2. (154 aa)    
Predicted Functional Partners:
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
  
 0.932
cbr4
Carbonyl reductase 4.
  
 0.927
hsd17b8
Hydroxysteroid (17-beta) dehydrogenase 8.
  
 0.927
LOC101173617
Malate synthase-like.
  
  
 0.879
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.710
adhfe1
Alcohol dehydrogenase iron containing 1.
  
 
 0.669
acad11
Acyl-CoA dehydrogenase family, member 11.
  
 0.665
eci2
Enoyl-CoA delta isomerase 2.
  
 0.631
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.604
LOC101172193
Peroxisomal biogenesis factor 5-like b.
   
 0.595
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.