STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2MEF6_ORYLAMelanocortin 4 receptor. (306 aa)    
Predicted Functional Partners:
pomc
Proopiomelanocortin.
    
 0.990
LOC101164777
Uncharacterized protein.
    
 0.977
mrap2
Melanocortin 2 receptor accessory protein 2b.
    
 
 0.823
LOC101155694
Peptide YYa.
  
 
 0.684
npy
Uncharacterized protein.
    
 0.680
LOC101171147
Agouti related neuropeptide.
    
 
 0.677
ENSORLP00000045126
Uncharacterized protein.
    
 
 0.588
lepa
Leptin-A; May function as part of a signaling pathway that acts to regulate the size of the body fat depot.
      
 0.568
LOC101167158
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
      
 0.560
opn3
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.559
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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