STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc12DnaJ (Hsp40) homolog, subfamily C, member 12. (208 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.601
gchfr
GTP cyclohydrolase I feedback regulator.
      
 0.559
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
      
 0.559
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.452
LOC101162931
Cardiomyopathy associated 5.
      
 0.442
pah
Phenylalanine hydroxylase.
    
 
 0.436
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
    
 
0.433
pfdn2
Prefoldin subunit 2.
      
 0.424
stub1
STIP1 homology and U-Box containing protein 1.
   
 
 0.415
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
    
 
 0.413
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.