STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOHUncharacterized protein. (364 aa)    
Predicted Functional Partners:
LOC101168652
Alpha-2-HS-glycoprotein 2.
   
 
 0.789
LOC101170246
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
   
 0.769
stil
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.713
ENSORLP00000043209
Alpha-1-microglobulin/bikunin precursor.
   
  
 0.706
fga
Fibrinogen alpha chain.
   
 0.696
LOC101160985
Fatty acid binding protein 1b, tandem duplicate 1.
   
  
 0.685
LOC101163240
Uncharacterized protein.
   
 0.648
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
   
 
 0.612
H2MBB3_ORYLA
Vitellogenin domain-containing protein.
   
 
 0.597
LOC101158990
Apolipoprotein Bb, tandem duplicate 2.
   
 
 0.597
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.