STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napepldN-acyl phosphatidylethanolamine phospholipase D. (388 aa)    
Predicted Functional Partners:
faah
Fatty acid amide hydrolase.
     
 0.828
yeats4
YEATS domain containing 4.
   
  
 0.669
mgll
Monoglyceride lipase.
     
 0.665
faah2
Fatty acid amide hydrolase 2b.
     
 0.598
trpv1
Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.596
erc1
ELKS/RAB6-interacting/CAST family member 1a.
    
 
 0.594
LOC101162174
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.594
CACNA2D4
Calcium voltage-gated channel auxiliary subunit alpha2delta 4.
      
 0.589
dcp1b
Decapping mRNA 1B.
      
 0.589
gde1
Glycerophosphodiester phosphodiesterase 1.
      
 0.577
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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