STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161952Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
H2LEI7_ORYLA
Si:dkey-165a24.9; Belongs to the G-protein coupled receptor 1 family.
  
     0.465
ubc
Ubiquitin B.
   
  0.449
LOC101166058
Uncharacterized protein.
  
 
   0.441
rps27a
Ribosomal protein S27a.
    
  0.430
LOC101158998
Olfactory receptor class A related 3; Belongs to the G-protein coupled receptor T2R family.
  
     0.405
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.