STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC18Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (465 aa)    
Predicted Functional Partners:
tmem86a
Transmembrane protein 86A.
      
 0.615
dlst
Dihydrolipoamide S-succinyltransferase.
    
 
 0.611
rras2
RAS related 2.
    
 0.579
vac14
Vac14 homolog (S. cerevisiae).
      
 0.535
ppp1r14b
Protein phosphatase 1, regulatory (inhibitor) subunit 14Bb.
      
 0.535
GOLGA7
Golgin A7.
    
 0.525
golga7b
Golgin A7 family member B.
    
 0.525
LOC111947425
Golgin A7.
    
 0.525
LOC101168845
Erf4 domain-containing protein.
    
 0.525
fancg
Uncharacterized protein.
   
  
 0.516
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.