zc3h18 protein (Oryzias latipes) - STRING interaction network

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Score

zc3h18

Zinc finger CCCH-type containing 18. (1139 aa)

Predicted Functional Partners:

Unc79

0.786

ncbp2

0.697

slain2

0.590

LOC101160447

0.537

TMEM132D

0.531

sf3a2

0.510

NCBP1

0.497

srrt

0.492

fryl

0.485

bms1

0.482

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101160447	NCBP1	ENSORLP00000038127	ENSORLP00000026641	RAN binding protein 2.	Nuclear cap binding protein subunit 1.	0.964
LOC101160447	bms1	ENSORLP00000038127	ENSORLP00000028972	RAN binding protein 2.	BMS1 ribosome biogenesis factor.	0.495
LOC101160447	ncbp2	ENSORLP00000038127	ENSORLP00000014087	RAN binding protein 2.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.962
LOC101160447	sf3a2	ENSORLP00000038127	ENSORLP00000019163	RAN binding protein 2.	Splicing factor 3a, subunit 2.	0.459
LOC101160447	slain2	ENSORLP00000038127	ENSORLP00000030067	RAN binding protein 2.	SLAIN motif family, member 2.	0.510
LOC101160447	srrt	ENSORLP00000038127	ENSORLP00000010190	RAN binding protein 2.	Serrate RNA effector molecule homolog (Arabidopsis).	0.418
LOC101160447	zc3h18	ENSORLP00000038127	ENSORLP00000017623	RAN binding protein 2.	Zinc finger CCCH-type containing 18.	0.537
NCBP1	LOC101160447	ENSORLP00000026641	ENSORLP00000038127	Nuclear cap binding protein subunit 1.	RAN binding protein 2.	0.964
NCBP1	ncbp2	ENSORLP00000026641	ENSORLP00000014087	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	sf3a2	ENSORLP00000026641	ENSORLP00000019163	Nuclear cap binding protein subunit 1.	Splicing factor 3a, subunit 2.	0.833
NCBP1	srrt	ENSORLP00000026641	ENSORLP00000010190	Nuclear cap binding protein subunit 1.	Serrate RNA effector molecule homolog (Arabidopsis).	0.987
NCBP1	zc3h18	ENSORLP00000026641	ENSORLP00000017623	Nuclear cap binding protein subunit 1.	Zinc finger CCCH-type containing 18.	0.497
TMEM132D	zc3h18	ENSORLP00000017089	ENSORLP00000017623	Transmembrane protein 132D.	Zinc finger CCCH-type containing 18.	0.531
Unc79	zc3h18	ENSORLP00000036344	ENSORLP00000017623	Uncharacterized protein.	Zinc finger CCCH-type containing 18.	0.786
bms1	LOC101160447	ENSORLP00000028972	ENSORLP00000038127	BMS1 ribosome biogenesis factor.	RAN binding protein 2.	0.495
bms1	zc3h18	ENSORLP00000028972	ENSORLP00000017623	BMS1 ribosome biogenesis factor.	Zinc finger CCCH-type containing 18.	0.482
fryl	zc3h18	ENSORLP00000035009	ENSORLP00000017623	Furry homolog, like.	Zinc finger CCCH-type containing 18.	0.485
ncbp2	LOC101160447	ENSORLP00000014087	ENSORLP00000038127	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	RAN binding protein 2.	0.962
ncbp2	NCBP1	ENSORLP00000014087	ENSORLP00000026641	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Nuclear cap binding protein subunit 1.	0.999
ncbp2	sf3a2	ENSORLP00000014087	ENSORLP00000019163	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	Splicing factor 3a, subunit 2.	0.982