STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR173G protein-coupled receptor 173. (380 aa)    
Predicted Functional Partners:
smim20
Small integral membrane protein 20.
      
 0.693
ENSORLP00000034314
Ankyrin repeat domain 9.
     
 0.518
gpr176
G protein-coupled receptor 176.
     
 0.486
zic1
Zic family member 1 (odd-paired homolog, Drosophila).
  
   
 0.425
kctd9
Potassium channel tetramerization domain containing 9a.
      
 0.421
GNRHR
Gonadotropin releasing hormone receptor.
      
 0.418
edn3
END domain-containing protein.
  
 
  0.407
LOC101157195
Neurotensin.
    
 0.405
edn1
Endothelin 1.
  
 
  0.403
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.