STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc15Coiled-coil domain containing 15. (404 aa)    
Predicted Functional Partners:
LOC101175061
Scm polycomb group protein like 2.
      
 0.831
SCML2
Scm polycomb group protein like 2.
      
 0.831
auts2
Activator of transcription and developmental regulator AUTS2 a.
      
 0.802
LOC101164924
IFI30 lysosomal thiol reductase.
      
 0.685
ifi30
Si:dkey-197i20.6.
      
 0.685
LOC101159203
Coiled-coil domain containing 106b.
      
 0.558
LOC101164334
Zgc:100829.
      
 0.529
LOC101162139
Uncharacterized protein.
      
 0.529
Nedd4
Uncharacterized protein.
      
 0.526
slc24a3
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.518
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.