Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC100301597 | LOC101163256 | ENSORLP00000045541 | ENSORLP00000017986 | Notochord homeobox. | T-box transcription factor 16. | 0.465 |
LOC100304457 | LOC101163256 | ENSORLP00000014441 | ENSORLP00000017986 | SRY-box transcription factor 32. | T-box transcription factor 16. | 0.473 |
LOC100304457 | gata5 | ENSORLP00000014441 | ENSORLP00000035830 | SRY-box transcription factor 32. | GATA binding protein 5. | 0.715 |
LOC101159498 | LOC101163256 | ENSORLP00000026304 | ENSORLP00000017986 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a. | T-box transcription factor 16. | 0.570 |
LOC101159498 | LOC101165390 | ENSORLP00000026304 | ENSORLP00000027917 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a. | Solute carrier family 41 member 2a. | 0.814 |
LOC101159498 | arhgap35 | ENSORLP00000026304 | ENSORLP00000008702 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a. | Uncharacterized protein. | 0.813 |
LOC101163256 | LOC100301597 | ENSORLP00000017986 | ENSORLP00000045541 | T-box transcription factor 16. | Notochord homeobox. | 0.465 |
LOC101163256 | LOC100304457 | ENSORLP00000017986 | ENSORLP00000014441 | T-box transcription factor 16. | SRY-box transcription factor 32. | 0.473 |
LOC101163256 | LOC101159498 | ENSORLP00000017986 | ENSORLP00000026304 | T-box transcription factor 16. | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a. | 0.570 |
LOC101163256 | LOC101164270 | ENSORLP00000017986 | ENSORLP00000018590 | T-box transcription factor 16. | Mesogenin 1. | 0.626 |
LOC101163256 | LOC101165390 | ENSORLP00000017986 | ENSORLP00000027917 | T-box transcription factor 16. | Solute carrier family 41 member 2a. | 0.583 |
LOC101163256 | LOC101169040 | ENSORLP00000017986 | ENSORLP00000021302 | T-box transcription factor 16. | Even-skipped-like1. | 0.471 |
LOC101163256 | arhgap35 | ENSORLP00000017986 | ENSORLP00000008702 | T-box transcription factor 16. | Uncharacterized protein. | 0.570 |
LOC101163256 | gata5 | ENSORLP00000017986 | ENSORLP00000035830 | T-box transcription factor 16. | GATA binding protein 5. | 0.461 |
LOC101163256 | rbpj | ENSORLP00000017986 | ENSORLP00000008785 | T-box transcription factor 16. | Recombination signal binding protein for immunoglobulin kappa J region. | 0.427 |
LOC101164270 | LOC101163256 | ENSORLP00000018590 | ENSORLP00000017986 | Mesogenin 1. | T-box transcription factor 16. | 0.626 |
LOC101165390 | LOC101159498 | ENSORLP00000027917 | ENSORLP00000026304 | Solute carrier family 41 member 2a. | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4a. | 0.814 |
LOC101165390 | LOC101163256 | ENSORLP00000027917 | ENSORLP00000017986 | Solute carrier family 41 member 2a. | T-box transcription factor 16. | 0.583 |
LOC101165390 | arhgap35 | ENSORLP00000027917 | ENSORLP00000008702 | Solute carrier family 41 member 2a. | Uncharacterized protein. | 0.813 |
LOC101169040 | LOC101163256 | ENSORLP00000021302 | ENSORLP00000017986 | Even-skipped-like1. | T-box transcription factor 16. | 0.471 |
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