STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gtf3c5General transcription factor IIIC, polypeptide 5. (530 aa)    
Predicted Functional Partners:
gtf3c3
General transcription factor IIIC, polypeptide 3.
   
 0.999
gtf3c4
General transcription factor IIIC, polypeptide 4.
   
 0.974
gtf3c2
General transcription factor IIIC, polypeptide 2, beta.
   
 0.968
Gtf3c1
Uncharacterized protein.
   
 0.957
ENSORLP00000033933
B-block_TFIIIC domain-containing protein.
   
 0.957
LOC101173800
Myb_DNA-bind_7 domain-containing protein.
    
 0.932
LOC101163291
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.859
H2MVC6_ORYLA
TFIIB-type domain-containing protein.
    
 0.859
ENSORLP00000036416
TFIIB domain-containing protein.
    
 0.859
gtf3c6
TFIIIC_sub6 domain-containing protein.
     
  0.831
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.