STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170383Regulator of calcineurin 3. (283 aa)    
Predicted Functional Partners:
ppp3r1
Uncharacterized protein.
    
 
 0.680
LOC101168674
Uncharacterized protein.
    
 
 0.680
LOC101162612
Serine/threonine-protein phosphatase.
    
 
 0.663
LOC101172250
Serine/threonine-protein phosphatase.
    
 
 0.663
LOC101156706
Serine/threonine-protein phosphatase.
    
 
 0.663
LOC101169815
Serine/threonine-protein phosphatase.
    
 
 0.663
LOC101168142
Serine/threonine-protein phosphatase.
    
 
 0.663
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.476
LOC101164827
Calcineurin-like EF-hand protein 2.
    
 
 0.459
tesc
Tescalcin a.
    
 
 0.459
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.