STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101158485NME/NM23 nucleoside diphosphate kinase 2a; Belongs to the NDK family. (175 aa)    
Predicted Functional Partners:
mrps10
Mitochondrial ribosomal protein S10.
   
 0.934
mrps16
Mitochondrial ribosomal protein S16.
  
 0.929
mrps22
Mitochondrial ribosomal protein S22.
   
 0.924
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
  
 0.920
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 0.920
mrps7
Mitochondrial ribosomal protein S7.
  
 0.911
Mrps6
Mitochondrial ribosomal protein S6.
   
  0.908
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
  
 0.902
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
  0.899
mrps26
Mitochondrial ribosomal protein S26.
   
 0.897
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.